Insertion junction: CLIP2.075671_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075671
Chromosome:chromosome 13
Location:5167734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607300 FAP352,MAPK5 (1 of 1) K08293 - mitogen-activated protein kinase [EC:2.7.11.24] (E2.7.11.24); Flagellar Associated Protein 352 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAGAGTCTCTTGAGCTATACGTTAACCGTGACTGCAGTTACTTGCCC
Internal bar code:AAGGGTCGTAAAACTCTTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTCGCCCAACCTTCACC
Suggested primer 2:TAATCCCCCGCTCCTACACA