Insertion junction: CLIP2.075672_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075672
Chromosome:chromosome 2
Location:3273544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097250 transportin-3 family protein; (1 of 1) K15436 - transportin-3 (TRPO3, MTR10) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAGCAAGTCGCTGTAAGGCCGTGTCGGGTGCTCGACACTGGCGGGCC
Internal bar code:AAGGCACGCGCCTATGTATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1313
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATTTCTGTCGCAAGCG
Suggested primer 2:GATGCCAAAGCGAGCTCATG