Insertion junction: CLIP2.075687_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075687
Chromosome:chromosome 10
Location:286966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419750 RPB3 DNA-directed RNA polymerase II, 36 kDa polypeptide; (1 of 1) K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTACCCAGCGGCAGAGCGTGAGGGTTAGAAAGATGCCCTGGCTGC
Internal bar code:ACCTTCCGGAAAAGAATGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5472
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCATTGAGGGAAGTGACA
Suggested primer 2:CGGGTCACTGTGCACAAAAG