Insertion junction: CLIP2.075691_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075691
Chromosome:chromosome 7
Location:4085012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340750 EXN11 RNaseT, SDN2 homolog; (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED 5'UTR
Cre07.g342950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATAGGCTTCATTTGTTCACGAGCTCAACCTCGTTGCACCCGCACGCT
Internal bar code:GGTACCTTTACGATTTCGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3333
LEAP-Seq percent confirming:64.2276
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTTCCCGATACCCGTAG
Suggested primer 2:GTAGGCGTTCTGTGTGTGGA