Insertion junction: CLIP2.075692_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075692
Chromosome:chromosome 17
Location:2555373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716026 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACCTGAACTACCGCTTGAAAATCATAGTCGGGAGCCCCAACGCAGAT
Internal bar code:TTGATCTAAGGGTGTTTTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2097
LEAP-Seq percent confirming:52.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGAAAGTGGGAGTGGAA
Suggested primer 2:GTGGCTCAGCAAAAGGTGTG