Insertion junction: CLIP2.075696_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075696
Chromosome:chromosome 9
Location:3112421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394176 (1 of 21) IPR000679 - Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCCGGTCCGACCACTCGGTTGCGCGCGCGGTCAGCACTGCACTTCCC
Internal bar code:TATCTAATGTTCCACGAATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2027
LEAP-Seq percent confirming:90.1099
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAAGCCGTGGAGGTTTA
Suggested primer 2:TCAGGTTGCGGATACAGCAG