Insertion junction: CLIP2.075704_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075704
Chromosome:chromosome 10
Location:2496363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435950 OPR47 OctotricoPeptide Repeat protein 47 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAGACCTTGTCGGTCAGTTTGCCCCTGCTACACACTGCACGGACGCTT
Internal bar code:TCTTGGGGTATAACGAGGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:662
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACGACCACCTGAACCG
Suggested primer 2:TGCAATGCTCGTGGTAGGAG