Insertion junction: CLIP2.075715_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075715
Chromosome:chromosome 3
Location:8892426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205249 (1 of 1) PTHR24115//PTHR24115:SF451 - FAMILY NOT NAMED // KINESIN-LIKE PROTEIN SUBITO 5'UTR
Cre03.g205361 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAGTCGAGGAGATGGCACTGCTGCTGCAGACTTACTTCGACGCTTCA
Internal bar code:TTTATCAGAGTATTATAGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2582
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCATACACCTGCACAG
Suggested primer 2:GAATACGGTAGTCGCCCCAG