Insertion junction: CLIP2.075718_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075718
Chromosome:chromosome 13
Location:3345071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586400 (1 of 1) 1.14.11.23//1.14.11.9 - Flavonol synthase / FLS // Flavanone 3-dioxygenase / Naringenin,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCAAACACCCCACTGCCGCACAGCACTCGAAGCACGTGCGCTACCCG
Internal bar code:TAGACGCTTTGCTCCCTAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2097
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCATTCTTGGCCACGGTA
Suggested primer 2:TGGGGTCTGGCACTTTGTTT