Insertion junction: CLIP2.075734_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075734
Chromosome:chromosome 3
Location:5156572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181000 (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGCAGGGGCCCGAGGCGTGGGTGCCGCCGATCACCGACGGGGTTCC
Internal bar code:CTGTGTAAGTGGAGACAAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4729
LEAP-Seq percent confirming:90.7895
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAACGTCCGCACTGATGT
Suggested primer 2:GCAATTGCACACACGTCAGT