Insertion junction: CLIP2.075736_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075736
Chromosome:chromosome 17
Location:1667496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708000 FAP260 Membrane-associated Flagellar Associated Protein 260; (1 of 11) PF13426 - PAS domain (PAS_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGGAAGTCCCCGCCGCCCAGGCGCCGCACCGCGCCCGCACGGAGCGG
Internal bar code:GAAAGCAGTGCCTTCTTCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5375
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACGCCTGCATCAATGG
Suggested primer 2:CCCCCATCCTCTTTCCCCTA