Insertion junction: CLIP2.075736_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075736
Chromosome:chromosome 17
Location:1667498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708000 FAP260 Membrane-associated Flagellar Associated Protein 260; (1 of 11) PF13426 - PAS domain (PAS_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACCTTGGCACAGAGCTCAGAACACGTAGGCGCGGCATGGGTACTGAT
Internal bar code:TAACGGTTGCGTGAATGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:788
LEAP-Seq percent confirming:75.5102
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCATCCTCTTTCCCCTA
Suggested primer 2:CATCACGCCTGCATCAATGG