Insertion junction: CLIP2.075738_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075738
Chromosome:chromosome 6
Location:7051089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297516 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR
Cre06.g297550 (1 of 1) K14649 - transcription initiation factor TFIID subunit 8 (TAF8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGCGACATTATGGCCGCGCGAGAAGGAGATGAAGGCACCTGCCATT
Internal bar code:TGAAGTCAGGTTTCGAAAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGTAGCGCTGCAGAACC
Suggested primer 2:CTGACACCCCTGTTCTCACC