Insertion junction: CLIP2.075748_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075748
Chromosome:chromosome 6
Location:5559755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287100 CAM11 Calmodulin-like protein; (1 of 2) PF13499//PF13833 - EF-hand domain pair (EF-hand_7) // EF-hand domain pair (EF-hand_8) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAGTTTTTCAGTCCGCGCGGAAGGCCAAAGCGTAAAATGCCTCCACG
Internal bar code:GCCGGTTTTTAGTCGAAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2407
LEAP-Seq percent confirming:31.4286
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGCAACCTCGTCCTTC
Suggested primer 2:AGTGACCGAGTCGTTTGCAT