Insertion junction: CLIP2.075749_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075749
Chromosome:chromosome 2
Location:6311923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387500 OPR38 OctotricoPeptide Repeat protein 38 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTGCCAAGCCAGGGCAGCAGCGGTTGCGCCGCGTTGCAGCTACAGG
Internal bar code:GCGGTCCTGGTAGTGGGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1353
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCCCTAACCGGAAAAG
Suggested primer 2:CAGGAGCGACCATGCAGTAA