Insertion junction: CLIP2.075756_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075756
Chromosome:chromosome 14
Location:144177
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g608452 (1 of 1) K11366 - ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] (USP22_27_51, UBP8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTCGGGTCGCGCCACGTATGCGCGAACCCACATGTGCCAGGGCTGC
Internal bar code:TGTAGAGTGCGACTAAGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:190
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAACCACAGATAAGCCT
Suggested primer 2:ACGTCGGCACTTCACTTCAT