Insertion junction: CLIP2.075760_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075760
Chromosome:chromosome 6
Location:2942143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273400 TMC2 putative tRNA (cytosine-5)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTTGACGCCTCTGCGTCAACTCGCACACCAAAATGACTGGCGGCAAG
Internal bar code:TTTAAGAGGTTGACCTAGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGTCGCAACCCAGAAGT
Suggested primer 2:AAACATGTGAACGCCCAAGC