Insertion junction: CLIP2.075772_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075772
Chromosome:chromosome 11
Location:4081841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481000 SNRK2F snRK1 family in Chlamydomonas, subgroup 2; (1 of 1) PTHR24343//PTHR24343:SF175 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGGGAAGACGGGGCGGGTTGCAAAAGGGCCGAAATGGCTCCGGTCG
Internal bar code:CTGAGGGCATGACAGACTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4087
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAAAAGTGCGTGCGACA
Suggested primer 2:TTTTGCAGCAGCGTGTTCTC