Insertion junction: CLIP2.075775_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075775
Chromosome:chromosome 12
Location:7347197
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g557950 DNJ27 (1 of 1) K09528 - DnaJ homolog subfamily C member 8 (DNAJC8); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCCCAACCGCCGGGGCTCTACCATACTCACGCATACCCCCAATCACA
Internal bar code:AGAAGCACCCTGGCGGTTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGCGACTTCATTTTCCA
Suggested primer 2:AACCTGCATTTTGACGCCAC