Insertion junction: CLIP2.075781_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075781
Chromosome:chromosome 16
Location:4763607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687850 PTK22 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype; Protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCGGCACCCCCCCTCCCCCTCCCCCCGTGTGCCTCAGCCTGCCACCA
Internal bar code:CTCCAACCATTTGATTCTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3647
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCTACTGCCTCAAACC
Suggested primer 2:ACATAGGTAGAGGCCCTGCA