Insertion junction: CLIP2.075783_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075783
Chromosome:chromosome 7
Location:2898139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAATCGTCGGCCGCTGTGCCCACACCGGAACTGCGGAAGGCGAGGAT
Internal bar code:TGGTTGTACTATCGTAGACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:915
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AATACCGCACCCACCAGAAG
Suggested primer 2:TCAGCACCAGAACCAGAACC