Insertion junction: CLIP2.075784_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075784
Chromosome:chromosome 9
Location:4622058
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g401663 (1 of 1) K14795 - ribosomal RNA-processing protein 36 (RRP36) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGGTGCCTTATGCCAAGTCCCAGCGACTGGTCAGCATCAAACACCCA
Internal bar code:ATGGACCCCTGTGTTTTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGTTGGGCGATATCATG
Suggested primer 2:CTCGTCACAACCTTTCCCGA