Insertion junction: CLIP2.075785_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075785
Chromosome:chromosome 9
Location:294520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386750 HSP90A Heat shock protein 90A; (1 of 1) K04079 - molecular chaperone HtpG (htpG, HSP90A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGCTGTTGCCTGGATTCTAGGGAAGATAACTGCACATGTGTAGGAGA
Internal bar code:CCAAATTAGCCCGTCGCACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2157
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGGGGTACACATACGGC
Suggested primer 2:AGACACGCTCACATCAGTGG