Insertion junction: CLIP2.075786_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075786
Chromosome:chromosome 5
Location:2092349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236802 (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATATGCTGGAGTGCATGGCCACGCACTGCCGCTTAGGCCACCGCCCAA
Internal bar code:CGGTATCCAGTAATTTAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:70.4225
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGGAACTTGATTAGCAG
Suggested primer 2:ACCGCATGCAGGTAGGTATG