Insertion junction: CLIP2.075791_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075791
Chromosome:chromosome 2
Location:5515421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114650 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATACACACTTGTCCCATAAATATATAACTGCTTCAGCTTCAGCCTTGC
Internal bar code:GTGGTAGTCCGCGATGACACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGCGCACAACAAAGTA
Suggested primer 2:TCCGTGAACAGCTCCAGAAC