Insertion junction: CLIP2.075794_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075794
Chromosome:chromosome 12
Location:5181084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527000 CDPK14 (1 of 1) PF07714//PF13202//PF13833 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calcium/calmodulin-dependent protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTAACCTCCGTGGCCTAGCCATACAAGTAATAGTCCAGCAGTCCTAC
Internal bar code:AACTTGTGCAAACTAAAGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5220
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTTGCCCTTGGACTTAT
Suggested primer 2:AAATGGTCAGAGGTCAGGCG