Insertion junction: CLIP2.075795_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075795
Chromosome:chromosome 1
Location:1711117
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g009450 DNJ22 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAAGGGCGTGTTTCTTGGTGCAATTGCAGGTTGTGGCGACAACAAT
Internal bar code:CCTATTTTCTAATAGTGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGTTCGCACATGCAGG
Suggested primer 2:TGTCGTCATCTCGCATACCG