Insertion junction: CLIP2.075798_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075798
Chromosome:chromosome 6
Location:2834115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272000 (1 of 1) PTHR10281//PTHR10281:SF1 - MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED // VACUOLE MEMBRANE PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTGAGGTTAAGCCAGGTAGGCGTTAGACGTCCTTCAACAATGAGTTA
Internal bar code:CTGTTTAGTGAACTTGTCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:513
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTGCGCCTCCTACACTC
Suggested primer 2:GGGAGCTTTGAAGACCGTGA