Insertion junction: CLIP2.075800_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075800
Chromosome:chromosome 10
Location:5142643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455500 GTF4 (1 of 2) PF17035 - Bromodomain extra-terminal - transcription regulation (BET); Global Transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCCCCATGCACTGCGACCCGCGAACCGACCCGTTCCCGCGCTCAGGC
Internal bar code:GCGCCAAGCCTTTGTGTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACTCACGAAGTCTCCA
Suggested primer 2:CCCGTCCGAGAAGTTGTTCA