Insertion junction: CLIP2.075802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075802
Chromosome:chromosome 8
Location:2863945
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g374100 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACCTGGCCCGTTTGCTTTTACACAGACGGAGGCCAACAGTGTTAGT
Internal bar code:CTTCCCTAAGATTGGAACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:891
LEAP-Seq percent confirming:63.0435
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGTAAACCGCGTCGTGA
Suggested primer 2:CGCCGTTACTAGGGGAATCC