Insertion junction: CLIP2.075806_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075806
Chromosome:chromosome 1
Location:1375716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007150 (1 of 1) PTHR12864:SF14 - RAN-BINDING PROTEINS 9/10 HOMOLOG 3'UTR
Cre01.g007200 (1 of 1) K16675 - palmitoyltransferase ZDHHC9/14/18 (ZDHHC9_14_18) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAGCACAGTGTACATTCATATTATAGCTAGTGTCCGCGACGACTGGAC
Internal bar code:AATCATTTTAGGCATATGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:966
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGCGGGTGGTTGTTTCG
Suggested primer 2:AATGCACCTATTGGCCTGCT