Insertion junction: CLIP2.075811_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075811
Chromosome:chromosome 14
Location:3335791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g629550 (1 of 1) K06963 - tRNA acetyltransferase TAN1 (TAN1, THUMPD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCTGTCGTCTCCGACAGCGCTCGTATCTTACGAAGGCAGGGGCGGC
Internal bar code:AATTTGTTAGACCAGGATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2144
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTCGCCAACTAGTACTC
Suggested primer 2:CCTGCCCCACATCCTCAATT