Insertion junction: CLIP2.075834_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075834
Chromosome:chromosome 10
Location:271695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419500 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCTGGACTCGAAAGCGCAAGTTGCACAAATAGGCGCACAAATTGGA
Internal bar code:TTGTTTTATGAAGTTCCAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:42.5
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGCTACCTGTGGCTATC
Suggested primer 2:GCGTAGTCAAATGCGACGTC