Insertion junction: CLIP2.075840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075840
Chromosome:chromosome 3
Location:4298170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800329 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGACTCTGACTCTGGTTCGCAATTACGTCAGTGTTAGCTGGATTGTTG
Internal bar code:CTATGGGTTCGCCATGCGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGGGTGCTTCATCTGTG
Suggested primer 2:ACATCCACGTCGAATGGCTT