Insertion junction: CLIP2.075840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075840
Chromosome:chromosome 3
Location:4298297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800329 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGCTCCCCTACTGGTGCTCGCATGAGTATGAATGTATTGAGTTTGCG
Internal bar code:GCCGATAAGGTTATGAGAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1792
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCACGTCGAATGGCTT
Suggested primer 2:ACAGGGGTGCTTCATCTGTG