Insertion junction: CLIP2.075842_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075842
Chromosome:chromosome 7
Location:3545348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336450 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCAATCGTTAACATCTACAAGGTTTTGAACAGCGCTTATACATTTT
Internal bar code:AAGTTTCAGTGGACGCCTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:22.8571
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCATCCTGCCAAGACAT
Suggested primer 2:GAGTCCCTCCAGAGCTCTCA