Insertion junction: CLIP2.075842_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075842
Chromosome:chromosome 7
Location:3545362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336450 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGAGGAGAAGCGGGGAGACAAATTTATCATTCTGCGCATGGCGTCGG
Internal bar code:CTTGAAAGGCCTTTGCGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCCCTCCAGAGCTCTCA
Suggested primer 2:CCGTCATCCTGCCAAGACAT