Insertion junction: CLIP2.075843_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075843
Chromosome:chromosome 16
Location:2716059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661900 HEL61 (1 of 3) PTHR24031//PTHR24031:SF232 - RNA HELICASE // ATP-DEPENDENT RNA HELICASE TDRD12-RELATED; DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGAAATGACTTGCGCTGCCACGCATGCCGGCAATGGCCGAATTGAT
Internal bar code:ATCCTATCCTACTTGAGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTCGGGTTCTAGCTAG
Suggested primer 2:GCTCCTCACCTCTTGCTGTT