Insertion junction: CLIP2.075845_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075845
Chromosome:chromosome 12
Location:1768901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCTCGCTTCAATCGCCCATGCAGATAGCGCGTCCCGGCTCGCCGTCC
Internal bar code:TGCTAGGCCGTAAATCTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:88
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGAGGTTCAAGTGGGAA
Suggested primer 2:GCGCCAGGGAATATTGCTTG