Insertion junction: CLIP2.075850_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075850
Chromosome:chromosome 2
Location:5450468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800237 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGCTAGACTCGATCGTGTCACTCTGACATTCCACACCCCGTCAGCA
Internal bar code:TTGAGCGCCGGTCTCGTACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1436
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCGAGTTTGTGGCGCTG
Suggested primer 2:CGACACGACGATGAAACACG