Insertion junction: CLIP2.075853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075853
Chromosome:chromosome 12
Location:4457747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520200 CPL8,PPO5 (1 of 1) PTHR13343//PTHR13343:SF16 - CREG1 PROTEIN // SUBFAMILY NOT NAMED; Conserved in the Plant Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGTAATGGGAGGATCGCCCATGAAGGGATATAGAGGCGCGTGAGGG
Internal bar code:GAAATATACGCGGGCCTAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACTGGAACCTGCCTTGC
Suggested primer 2:CCCAGTCAGCACGTTTGTTG