Insertion junction: CLIP2.075856_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075856
Chromosome:chromosome 15
Location:506411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635998 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCGACCAGGCGACGGAGAGGAGTGGTGGAGCCATGCCTACGCGCAC
Internal bar code:GAATCGGCCATTTTGGTCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1455
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTATAGCATTGCCTCCT
Suggested primer 2:CTGTGTGGCACTCGTGTAGT