Insertion junction: CLIP2.075858_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075858
Chromosome:chromosome 16
Location:6295324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676100 (1 of 1) IPR000210//IPR006502//IPR011333//IPR011705 - BTB/POZ domain // Protein of unknown function PDDEXK-like // POZ domain // BTB/Kelch-associated 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCCGCGCCACATGCGTGCCTTGTCACGTTCCCAACACCCCAAGCAT
Internal bar code:TTATTGAGTGGGGGCAATACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:884
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTATTTGATGGCCGCAAT
Suggested primer 2:GACATCGGTGGATAGCTGCA