Insertion junction: CLIP2.075875_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075875
Chromosome:chromosome 3
Location:707953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145847 (1 of 93) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGCCTAAAACCCTGACCTATGACTTACTCAGTTCAAGGCTCGTACAT
Internal bar code:GTAGGTTTGAGGTGGGTGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1606
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGTGAACTGCGAGACC
Suggested primer 2:AGGGTAGCTAGGTGGTCAGG