Insertion junction: CLIP2.075876_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075876
Chromosome:chromosome 13
Location:4944397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605800 (1 of 1) PTHR11544:SF59 - COLD SHOCK-LIKE PROTEIN CSPF-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGCACTCTTGAAGACTTCGAGCGTTGCTTACATTGGTCAGTCCCATG
Internal bar code:GCACGTGTAAACCAAGAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1979
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGCGTGTTGTTAGC
Suggested primer 2:AGGACATGCTGACACGACAG