Insertion junction: CLIP2.075889_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075889
Chromosome:chromosome 1
Location:222735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001350 ABC1 (1 of 3) 3.6.3.47 - Fatty-acyl-CoA-transporting ATPase; ABC transporter 5'UTR
Cre01.g001400 ZMP1 (1 of 1) 3.4.24.36 - Leishmanolysin / Promastigote surface endopeptidase; Zinc-metallopeptidase-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAGCAACCACATCAGCAGCCGCGAAGCTTTGAGAGCAACTGTCTACGA
Internal bar code:GCCGTACCTCTGCGCCCGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1563
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGGCAAAGAGGTATGT
Suggested primer 2:CCGTTTGGTTTAAGGCCAGC