Insertion junction: CLIP2.075892_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075892
Chromosome:chromosome 10
Location:3632709
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g801148 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGATAATACGCCACGCCAGCGCCTGGAAAGAAACGCCGCCCAAAAGGA
Internal bar code:CGATCGGATACTCCCAGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1252
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACCGGATGCAACATGCT
Suggested primer 2:TTGCGTTGGTTGTCAGCATG