Insertion junction: CLIP2.075896_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075896
Chromosome:chromosome 11
Location:621626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTAGCGGCCTGGTGCAGCGCCCGATGCACCATACATGCCAGGAGCCA
Internal bar code:CTTTCCTTAAGCATAGAGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1771
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGGGAGTCTCAAGTGC
Suggested primer 2:GCAGAGCTGGTTTGGTGTTG