Insertion junction: CLIP2.075897_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075897
Chromosome:chromosome 9
Location:3060188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393839 (1 of 21) IPR000679 - Zinc finger, GATA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCAACGTAACCTCATCCATCTCTTCCTCCTGTTCCTGATCTGTATGCT
Internal bar code:TAGGTCTCCGTGACGTCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3436
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTCAATCTGGGGACTGC
Suggested primer 2:CGCATAGCCATTTCAGTGCC