Insertion junction: CLIP2.075899_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075899
Chromosome:chromosome 16
Location:7049651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674403 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCATCGGCAATAGAGTAATGTCTTGGCGCATTCAGGACCTTAAAAA
Internal bar code:AGTGTGGGAGTGGTCAGCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:5193
LEAP-Seq percent confirming:82.2222
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGACCTTCACTCACCG
Suggested primer 2:ACTAGGGTGTCACTTGCACG